limix.io.bimbam.read_phenotype¶

limix.io.bimbam.read_phenotype(filepath)[source]¶

Read a BIMBAM phenotype file.

Parameters:	filepath (str) – File path.
Returns:	DataFrame representation of the file.
Return type:	`pandas.DataFrame`

Examples

>>> import limix
>>> from limix.example import file_example
>>>
>>> with file_example("ex0/phenotype.gemma") as filepath:
...     print(limix.io.bimbam.read_phenotype(filepath))
         0        1        2
0  1.20000 -0.30000 -1.50000
1      nan  1.50000  0.30000
2  2.70000  1.10000      nan
3 -0.20000 -0.70000  0.80000
4  3.30000  2.40000  2.10000